BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B12LP1|AL425820
(534 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1082 1009 0.0
3x_Contig1609 637 0.0
>3x_Contig1082
Length = 4646
Score = 1009 bits (507), Expect = 0.0
Identities = 518/523 (99%)
Strand = Plus / Minus
Query: 1 gggaagtattgtatatcgagtaaaaktgtatttgatgatagagatatcatcaattgtcta 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2629 gggaagtattgtatatcgagtaaaagtgtatttgatgatagagatatcatcaattgtcta 2570
Query: 61 ttagaaattacatcaacacagcaaaatacatgactagtccatttccaaaatttccaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2569 ttagaaattacatcaacacagcaaaatacatgactagtccatttccaaaatttccaagtt 2510
Query: 121 taaaattgaataccggtgcatcaatcacgtacctcggtttcagcacatggccatcaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2509 taaaattgaataccggtgcatcaatcacgtacctcggtttcagcacatggccatcaagtc 2450
Query: 181 gtgccgacgtgtacactgcagttatccgccttgaaaactcgttgcagatacattgatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2449 gtgccgacgtgtacactgcagttatccgccttgaaaactcgttgcagatacattgatgct 2390
Query: 241 gccgcaatgtacggaaacgagactgcagttggaaaaggcatcagagattctggtattcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2389 gccgcaatgtacggaaacgagactgcagttggaaaaggcatcagagattctggtattcca 2330
Query: 301 agagaagagatcttcgttaccaccaagctatggaatactcaacaaagagatccagcwagt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2329 agagaagagatcttcgttaccaccaagctatggaatactcaacaaagagatccagcaagt 2270
Query: 361 gctttaaatgagtctttggaacggttaggtttggactacgtggatttgttcttgatacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2269 gctttaaatgagtctttggaacggttaggtttggactacgtggatttgttcttgatacat 2210
Query: 421 tggccggttccattgaaaccagttggtggttccaagaacatcttgaaatacccaacccag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2209 tggccggttccattgaaaccagttggtggttccaagaacatcttgaaatacccaacccag 2150
Query: 481 gaattacaccacaggttgacactgaagattggagttttatcaa 523
||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2149 gaattacaccacaggttgacaaaaaagattggagttttatcaa 2107
>3x_Contig1609
Length = 15966
Score = 637 bits (320), Expect = 0.0
Identities = 473/523 (90%), Gaps = 3/523 (0%)
Strand = Plus / Plus
Query: 4 aagtattgtatatcgagtaaaaktgtatttgatgatagagatatcatcaattgtctatta 63
|||||||||||||||||||||| || |||| |||||||||||||||| ||| ||||||||
Sbjct: 3723 aagtattgtatatcgagtaaaagtgcatttaatgatagagatatcattaatcgtctatta 3782
Query: 64 gaaattacatcaacacagcaaaatacatgactagtccatttccaaaatttccaagtttaa 123
||||||||||||||||||||||| ||||||||||||||| | | ||||||||||| |||
Sbjct: 3783 gaaattacatcaacacagcaaaagacatgactagtccatctggagaatttccaagtctaa 3842
Query: 124 aattgaataccggtgcatcaatcacgtacctcggtttcagcacatggccatcaagtcgtg 183
||||||||||||||||||||||| || | ||||||||| |||||||||||||||||| ||
Sbjct: 3843 aattgaataccggtgcatcaatcccgcagctcggtttcggcacatggccatcaagtcatg 3902
Query: 184 ccgacgtgtacactgcagttatcc--gccttgaaaactcgttgcagatacattgatgctg 241
|||| | ||||||||| |||||| |||||||||||| ||| |||| |||| |||||||
Sbjct: 3903 ccgatgcgtacactgctgttatcactgccttgaaaactggttacagacacatcgatgctg 3962
Query: 242 ccgcaatgtacggaaacgagactgcagttggaaaaggcatcagagattctggtattccaa 301
|||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 3963 ccgcaatgtatggaaacgaagctgcagttggaaaaggtatcagagattctggtattccaa 4022
Query: 302 gagaagagatcttcgttaccaccaagctatggaatactcaacaaagagatccagcwagtg 361
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4023 gagaggagatcttcgttaccaccaagctatggaatactcaacaaagagatccagcaagtg 4082
Query: 362 ctttaaatgagtctttggaacggttaggtttggactacgtggatttgttcttgatacatt 421
|||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4083 ctttggatgagtctttagaacggttgggtttggactacgtggatttgttcttgatacatt 4142
Query: 422 ggccggttccattgaaaccagttggtggttccaagaacatcttgaaatacccaac-ccag 480
||||||||||||| || |||||||| ||| | | || |||||||||||||||| ||||
Sbjct: 4143 ggccggttccattaaagccagttggcggtccagaaaatctcttgaaatacccaactccag 4202
Query: 481 gaattacaccacaggttgacactgaagattggagttttatcaa 523
|||||| |||||| |||||||||||||||||||||| |||||
Sbjct: 4203 gaattaagccacagattgacactgaagattggagtttcatcaa 4245
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4165
Number of Sequences: 1807
Number of extensions: 4165
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 2
length of query: 534
length of database: 10,358,551
effective HSP length: 16
effective length of query: 518
effective length of database: 10,329,639
effective search space: 5350753002
effective search space used: 5350753002
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)